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A Shiny server module that preprocesses the ENA dataset for use in the table and other tabs. It standardizes taxonomic divisions, extracts tags, parses coordinates, and orders rows by publication date.

Usage

datasetServer(id, df)

Arguments

id

Character string for namespacing the module

df

A reactive expression returning a data.frame with ENA query results.

Value

A reactive expression returning a processed data.frame with cleaned taxonomic information, split tags, and parsed coordinates, ready for use in tables and visualizations.